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combineSQMlite
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.. container::

   ============== ===============
   combineSQMlite R Documentation
   ============== ===============

   .. rubric:: Combine several SQM or SQMlite objects
      :name: combineSQMlite

   .. rubric:: Description
      :name: description

   Combine an arbitrary number of SQM or SQMlite objects into a single
   SQMlite object. This function accepts objects originating from
   different projects (i.e. different SqueezeMeta runs).

   .. rubric:: Usage
      :name: usage

   .. code:: R

      combineSQMlite(...)

   .. rubric:: Arguments
      :name: arguments

   +---------+-----------------------------------------------------------+
   | ``...`` | an arbitrary number of SQM or SQMlite objects.            |
   |         | Alternatively, a single list containing an arbitrary      |
   |         | number of SQMlite objects.                                |
   +---------+-----------------------------------------------------------+

   .. rubric:: Value
      :name: value

   A SQMlite object

   .. rubric:: See Also
      :name: see-also

   ``combineSQM``

   .. rubric:: Examples
      :name: examples

   .. code:: R

      ## Not run: 
      data(Hadza)
      # Load data coming from a different run
      other = loadSQMlite("/path/to/other/project/tables") # e.g. if the project was run using sqm_reads
      # (We could also use loadSQM to load the data as long as the data comes from a SqueezeMeta run)
      combined = combineSQMlite(Hadza, other)
      # Now we can plot together the samples from Hadza and the second project
      plotTaxonomy(combined, 'family')

      ## End(Not run)